Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6844

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252039 to 252813 15211 mRNA_6844: 15212 - K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101, at 253096 to 258115 15212 mRNA_6845: 15213 - Hypothetical Protein, at 258219 to 259363 15213

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
252,147 + 15211 mRNA_6843 0.14 0.1
252,160 - 15211 mRNA_6843 0.16 1.0
252,165 + 15211 mRNA_6843 0.16 -0.2
252,315 + 15211 mRNA_6843 0.36 0.1
252,324 - 15211 mRNA_6843 0.37 1.1
252,330 - 15211 mRNA_6843 0.38 1.4
252,416 - 15211 mRNA_6843 0.49 0.9
252,599 - 15211 mRNA_6843 0.72 0.9
252,610 - 15211 mRNA_6843 0.74 -0.7
253,184 - -0.2
253,309 + 0.3
253,494 - 0.3
253,665 + 15212 mRNA_6844 0.11 0.5
253,724 + 15212 mRNA_6844 0.13 -0.5
253,733 - 15212 mRNA_6844 0.13 0.3
253,761 - 15212 mRNA_6844 0.13 0.4
253,788 + 15212 mRNA_6844 0.14 1.5
254,188 + 15212 mRNA_6844 0.22 0.2
254,330 + 15212 mRNA_6844 0.25 0.2
254,607 - 15212 mRNA_6844 0.30 1.9
254,663 - 15212 mRNA_6844 0.31 2.1
254,728 - 15212 mRNA_6844 0.33 0.4
254,776 + 15212 mRNA_6844 0.33 -0.0
255,611 - 15212 mRNA_6844 0.50 1.9
258,228 - -0.5
258,290 + 1.2
258,445 - 15213 mRNA_6845 0.20 0.2
258,447 + 15213 mRNA_6845 0.20 0.1
258,676 - 15213 mRNA_6845 0.40 -2.2
258,798 - 15213 mRNA_6845 0.51 1.8
258,811 + 15213 mRNA_6845 0.52 -0.5
258,812 + 15213 mRNA_6845 0.52 0.4
258,907 + 15213 mRNA_6845 0.60 -0.1
258,981 + 15213 mRNA_6845 0.67 0.0
259,055 - 15213 mRNA_6845 0.73 -0.4