Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6726

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094 mRNA_6727: 15095 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 3595 to 4704 15095

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,318 - -0.2
1,688 + 2.3
1,688 + 0.1
1,714 - 3.1
1,889 - 2.2
1,889 - 0.1
2,290 + 15094 mRNA_6726 0.33 -0.5
2,349 - 15094 mRNA_6726 0.36 0.7
2,383 - 15094 mRNA_6726 0.38 2.8
2,391 - 15094 mRNA_6726 0.38 1.2
2,422 - 15094 mRNA_6726 0.40 1.6
2,442 - 15094 mRNA_6726 0.41 0.4
2,472 + 15094 mRNA_6726 0.43 -0.1
2,475 - 15094 mRNA_6726 0.43 0.5
2,531 - 15094 mRNA_6726 0.47 0.1
2,889 - 15094 mRNA_6726 0.68 2.2
2,898 + 15094 mRNA_6726 0.68 2.3
2,928 + 15094 mRNA_6726 0.70 -0.9
2,957 - 15094 mRNA_6726 0.72 -1.1
3,026 + 15094 mRNA_6726 0.76 0.6
3,149 + 15094 mRNA_6726 0.83 0.5
3,291 + -0.7
3,296 - 0.3
3,335 + 0.7
3,462 + 0.5
3,566 - -0.5
3,745 + 15095 mRNA_6727 0.14 2.2
3,751 - 15095 mRNA_6727 0.14 -0.9
3,878 + 15095 mRNA_6727 0.25 1.7
4,005 + 15095 mRNA_6727 0.37 0.5