Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6725

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6725: 15093 - K07575 K07575 PUA domain protein, at 176 to 1349 15093 mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1 + 0.8
4 + 0.2
9 + 1.2
12 + 0.1
18 + -0.3
34 + 0.2
49 - -1.4
50 - 1.3
56 + -0.3
71 + -0.4
71 + -0.2
71 + -0.1
71 + -0.5
74 + -0.1
74 - -0.4
79 + 0.2
86 + -0.1
97 + 0.2
112 + -0.2
135 + -0.8
135 - 0.4
135 + 0.7
228 + 1.3
231 - -0.8
268 + 0.2
288 + 3.5
380 + 15093 mRNA_6725 0.17 1.3
1,318 - -0.2
1,688 + 2.3
1,688 + 0.1
1,714 - 3.1
1,889 - 2.2
1,889 - 0.1
2,290 + 15094 mRNA_6726 0.33 -0.5
2,349 - 15094 mRNA_6726 0.36 0.7