Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6650

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6649: 15017 - K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3, at 1344681 to 1347468 15017 mRNA_6650: 15018 - HMMPfam-Domain of unknown function (DUF1772)-PF08592, at 1348081 to 1348867 15018 mRNA_6651: 15019 - K20793 NAA50, NAT5 N-alpha-acetyltransferase 50, at 1349329 to 1350495 15019

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,347,278 + 0.7
1,347,503 - -0.6
1,347,798 - -0.3
1,347,836 - -2.1
1,347,986 - 1.5
1,347,989 - 0.8
1,348,090 - 0.6
1,348,131 + 0.2
1,348,541 + 15018 mRNA_6650 0.58 1.7
1,348,552 - 15018 mRNA_6650 0.60 0.9
1,348,558 + 15018 mRNA_6650 0.61 0.5
1,348,617 - 15018 mRNA_6650 0.68 1.6
1,348,716 + 15018 mRNA_6650 0.81 0.2
1,348,787 - 15018 mRNA_6650 0.90 -0.5
1,348,983 + -0.1
1,349,007 + -0.7
1,349,013 - -1.4
1,349,024 + 0.4
1,349,145 + 0.2
1,349,146 + -0.7
1,349,149 + -0.9
1,349,155 - -0.7
1,349,158 - 0.1
1,349,277 - -0.2
1,349,459 + 15019 mRNA_6651 0.11 0.5