Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6617

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6616: 14984 - Hypothetical Protein, at 1256370 to 1257792 14984 mRNA_6617: 14985 - K15544 SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72, at 1258032 to 1259206 14985

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,257,230 - 14984 mRNA_6616 0.60 -0.9
1,257,514 + 14984 mRNA_6616 0.80 2.4
1,257,524 + 14984 mRNA_6616 0.81 -1.2
1,257,806 + 0.3
1,257,958 - 0.1
1,257,974 + -0.4
1,257,977 + 0.8
1,258,114 + -2.2
1,258,213 - 14985 mRNA_6617 0.15 -0.4
1,258,640 - 14985 mRNA_6617 0.52 1.7
1,258,820 + 14985 mRNA_6617 0.67 0.8
1,258,946 - 14985 mRNA_6617 0.78 1.5
1,259,409 - -0.0
1,259,589 - -0.5
1,259,851 - 0.0
1,259,877 + -0.9
1,259,909 + 1.5
1,259,973 + -0.3
1,259,999 - 0.0
1,260,107 - 0.7
1,260,130 - 0.4
1,260,150 + 1.3
1,260,150 - 2.5