Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6518

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6517: 14885 - K12879 THOC2 THO complex subunit 2, at 975368 to 982291 14885 mRNA_6518: 14886 - K05712 mhpA 3-(3-hydroxy-phenyl)propionate hydroxylase, at 982415 to 984966 14886 mRNA_6519: 14887 - K11806 WDSOF1 WD repeat and SOF domain-containing protein 1, at 985258 to 987431 14887

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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981,565 - 14885 mRNA_6517 0.90 1.1
982,082 - 0.7
982,684 + 14886 mRNA_6518 0.11 1.1
982,845 + 14886 mRNA_6518 0.17 0.1
983,458 + 14886 mRNA_6518 0.41 0.4
983,573 - 14886 mRNA_6518 0.45 -0.6
983,575 + 14886 mRNA_6518 0.45 0.4
983,907 + 14886 mRNA_6518 0.58 -1.0
984,256 - 14886 mRNA_6518 0.72 -0.5
984,283 - 14886 mRNA_6518 0.73 0.8
984,416 + 14886 mRNA_6518 0.78 0.4
984,465 + 14886 mRNA_6518 0.80 0.5
984,749 + -1.9
984,750 + 0.7
984,753 - -1.0
984,756 + -0.2
985,016 - 0.3
985,029 + -1.1
985,030 + 0.6
985,031 - 2.4
985,042 - 1.6
985,057 + 1.9
985,057 - -0.4
985,069 + 0.4
985,084 - -0.3
985,088 - -0.5
985,112 + 0.2
985,172 + -0.6
985,183 - 0.2
985,205 - 1.1
985,208 + 2.3
985,241 + -0.6