Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6515

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968322 to 969938 14882 mRNA_6515: 14883 - K16578 CLASP1_2 CLIP-associating protein 1/2, at 970088 to 973817 14883 mRNA_6516: 14884 - Hypothetical Protein, at 974162 to 975105 14884

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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969,313 + 14882 mRNA_6514 0.61 -0.7
969,484 - 14882 mRNA_6514 0.72 0.8
969,658 + 14882 mRNA_6514 0.83 -0.4
969,767 + 14882 mRNA_6514 0.89 -1.5
969,780 + -0.1
970,112 + 1.0
970,376 - -0.1
970,829 + 14883 mRNA_6515 0.20 0.9
971,209 + 14883 mRNA_6515 0.30 0.2
971,500 + 14883 mRNA_6515 0.38 1.6
971,802 - 14883 mRNA_6515 0.46 0.6
972,141 + 14883 mRNA_6515 0.55 0.4
972,545 - 14883 mRNA_6515 0.66 -0.3
972,846 - 14883 mRNA_6515 0.74 -0.0
973,019 + 14883 mRNA_6515 0.79 -0.5
973,425 - 14883 mRNA_6515 0.89 0.6
973,434 + 14883 mRNA_6515 0.90 1.3
973,466 + -0.5
973,570 + -0.8
973,571 + -1.6
973,586 + -0.8
973,602 - 1.8
973,697 - -1.2
973,718 + 0.3
973,723 + -0.8
973,744 - 0.5
973,897 - 1.4
973,913 - 0.3
973,914 + 0.0
974,056 + 1.0
974,063 - 0.5
974,205 + -0.7
974,485 + 14884 mRNA_6516 0.34 0.3
974,624 + 14884 mRNA_6516 0.49 0.2
974,640 + 14884 mRNA_6516 0.51 -0.3