Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6503

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6502: 14870 - K02971 RP-S21e, RPS21 small subunit ribosomal protein S21e, at 937840 to 938370 14870 mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939011 to 940996 14871 mRNA_6504: 14872 - Hypothetical Protein, at 941388 to 943563 14872

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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938,795 + -1.2
938,796 - -0.6
938,798 - 0.2
938,798 - 1.5
938,809 + 0.4
938,815 + -0.2
938,938 + 0.7
938,965 - -0.7
939,092 - -0.0
939,106 - 0.4
939,113 - -0.7
939,123 - 0.4
939,128 + 0.5
939,402 + 14871 mRNA_6503 0.20 0.6
939,402 + 14871 mRNA_6503 0.20 -0.2
939,555 + 14871 mRNA_6503 0.27 0.3
939,792 - 14871 mRNA_6503 0.39 2.7
939,884 - 14871 mRNA_6503 0.44 0.2
940,128 - 14871 mRNA_6503 0.56 1.2
940,174 + 14871 mRNA_6503 0.59 0.7
940,409 - 14871 mRNA_6503 0.70 0.3
940,415 - 14871 mRNA_6503 0.71 2.7
940,962 + 0.3
940,964 - 0.5
940,998 - 0.2
941,008 + 0.9
941,083 - 0.2
941,085 - 0.4
941,087 - -1.0
941,134 - 0.2
941,140 - -0.7
941,149 + 1.3
941,159 + -1.1
941,159 + -1.5
941,180 - -0.7
941,266 + 0.1
941,284 + -1.0
941,290 + -0.2
941,318 + 0.2
941,430 - -0.3
941,467 - 0.5
941,501 + 0.5
941,603 - 0.3
941,708 + 14872 mRNA_6504 0.15 0.4
941,773 + 14872 mRNA_6504 0.18 0.8