Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6485

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898441 to 899753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900253 to 901810 14854

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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897,606 + 0.2
897,698 + 0.4
897,956 + 1.1
898,050 + 0.3
898,079 - -2.1
898,107 + 0.0
898,139 - -0.8
898,139 + -0.5
898,153 + 0.5
898,153 + 0.1
898,208 + -1.0
898,261 - 0.1
898,288 - 0.8
898,550 + 0.0
898,562 + 0.0
898,841 - 14853 mRNA_6485 0.30 -0.9
899,044 - 14853 mRNA_6485 0.46 0.1
899,124 - 14853 mRNA_6485 0.52 1.9
899,270 - 14853 mRNA_6485 0.63 1.9
899,426 - 14853 mRNA_6485 0.75 0.5
899,852 - -0.3
899,875 + 0.9
899,900 - 0.5
899,902 - -1.2
900,013 - 1.1
900,039 - 1.3
900,194 - 0.9
900,200 + -0.5
900,213 - 0.5
900,320 + 0.5
900,480 - 14854 mRNA_6486 0.15 0.4