Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6432

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799 mRNA_6432: 14800 - K18203 LCMT1 [phosphatase 2A protein]-leucine-carboxy methyltransferase, at 788062 to 789443 14800 mRNA_6433: 14801 - K12180 COPS7, CSN7 COP9 signalosome complex subunit 7, at 789986 to 791469 14801

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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787,076 - 14799 mRNA_6431 0.49 -2.4
787,191 - 14799 mRNA_6431 0.59 0.6
787,205 - 14799 mRNA_6431 0.60 -0.3
787,294 - 14799 mRNA_6431 0.68 0.2
787,494 + 14799 mRNA_6431 0.85 1.1
787,554 + 0.1
787,884 - 1.6
787,897 - 0.0
788,026 - 2.1
788,246 - 14800 mRNA_6432 0.13 0.4
788,330 - 14800 mRNA_6432 0.19 0.3
788,465 + 14800 mRNA_6432 0.29 1.0
788,888 + 14800 mRNA_6432 0.60 0.9
788,902 + 14800 mRNA_6432 0.61 0.0
788,933 - 14800 mRNA_6432 0.63 0.4
789,030 + 14800 mRNA_6432 0.70 0.1
789,338 - 0.2
789,352 + -0.3
789,481 - 1.2
789,483 - 1.2
789,528 + 0.9
789,596 - 0.8
789,761 + 0.7
789,766 - 0.8
789,766 - 0.2
789,766 - 0.6
789,769 + 0.2
789,773 + 0.8
789,774 - -1.3
789,786 + 0.9
789,786 + 0.1
789,897 - 0.8
789,914 - 1.3
789,915 + 1.7
789,935 + -0.1
789,942 + 1.8
789,943 + -0.1
789,954 + 1.7
790,050 - 1.0
790,087 + 1.2
790,246 + 14801 mRNA_6433 0.18 0.8