Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6430

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634 14797 mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798 mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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784,012 - 1.2
784,055 + 0.5
784,070 + -0.8
784,077 + 0.5
784,084 - 0.0
784,122 + 0.3
784,258 - 14797 mRNA_6429 0.20 1.0
784,479 + 14797 mRNA_6429 0.67 -0.5
784,808 - -0.9
784,827 - -0.3
784,827 + -0.1
784,924 + 1.0
784,941 - -0.9
784,968 + -0.1
784,972 - -0.4
784,976 + 0.3
784,980 + -0.1
785,096 + 2.3
785,100 - 0.1
785,101 + 0.8
785,103 + 0.1
785,113 - 1.2
785,124 - 14798 mRNA_6430 0.11 1.8
785,141 - 14798 mRNA_6430 0.12 -0.2
785,358 - 14798 mRNA_6430 0.31 1.4
785,406 - 14798 mRNA_6430 0.35 -1.9
785,406 - 14798 mRNA_6430 0.35 1.5
785,481 - 14798 mRNA_6430 0.42 0.3
785,797 + 14798 mRNA_6430 0.69 -0.3
785,970 - 14798 mRNA_6430 0.85 0.2
786,141 + -0.7
786,150 - 0.3
786,260 + 1.7
786,263 - 1.0
786,270 - 0.2
786,379 - -1.4
786,424 - 1.4
786,425 - -0.1
786,563 - -0.3
786,575 + -0.3
787,076 - 14799 mRNA_6431 0.49 -2.4