Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6429

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634 14797 mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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783,168 - 0.6
783,195 - -0.1
783,295 - 0.6
783,483 - -0.4
783,489 + 0.6
783,500 + 0.6
783,601 - -1.0
783,618 + 1.3
783,628 + 0.0
783,630 - 0.3
783,632 - 0.2
783,639 + -0.9
783,640 + -0.4
783,647 + 0.2
783,664 + -0.5
783,664 + -0.7
783,674 + 0.4
783,676 - 0.4
783,679 + 0.5
783,701 + 0.5
783,777 - 1.1
783,812 - -2.9
783,924 - 0.5
783,947 - 0.4
783,949 - -0.6
783,954 + 2.1
783,979 + -0.1
783,988 - 0.1
784,012 - 1.2
784,055 + 0.5
784,070 + -0.8
784,077 + 0.5
784,084 - 0.0
784,122 + 0.3
784,258 - 14797 mRNA_6429 0.20 1.0
784,479 + 14797 mRNA_6429 0.67 -0.5
784,808 - -0.9
784,827 - -0.3
784,827 + -0.1
784,924 + 1.0
784,941 - -0.9
784,968 + -0.1
784,972 - -0.4
784,976 + 0.3
784,980 + -0.1
785,096 + 2.3
785,100 - 0.1
785,101 + 0.8
785,103 + 0.1
785,113 - 1.2
785,124 - 14798 mRNA_6430 0.11 1.8
785,141 - 14798 mRNA_6430 0.12 -0.2
785,358 - 14798 mRNA_6430 0.31 1.4
785,406 - 14798 mRNA_6430 0.35 -1.9
785,406 - 14798 mRNA_6430 0.35 1.5
785,481 - 14798 mRNA_6430 0.42 0.3