Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6428

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6427: 14795 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 773204 to 778326 14795 mRNA_6428: 14796 - KOG2208 Vigilin, at 779181 to 783068 14796

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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778,240 + 0.6
778,263 + -1.0
778,290 + 0.3
778,647 - 0.9
778,742 + 1.0
778,785 + -0.2
778,861 + 1.8
778,883 - 0.1
778,883 - 0.6
778,909 - 0.4
778,913 + 0.5
779,053 - 0.2
779,541 + -1.4
779,809 + 14796 mRNA_6428 0.16 2.8
780,038 + 14796 mRNA_6428 0.22 2.3
780,040 - 14796 mRNA_6428 0.22 -1.5
780,156 - 14796 mRNA_6428 0.25 -0.3
780,248 - 14796 mRNA_6428 0.27 -1.2
780,273 + 14796 mRNA_6428 0.28 0.6
780,389 - 14796 mRNA_6428 0.31 1.1
780,422 + 14796 mRNA_6428 0.32 0.5
780,499 - 14796 mRNA_6428 0.34 -1.2
780,654 - 14796 mRNA_6428 0.38 0.7
780,666 - 14796 mRNA_6428 0.38 0.8
780,945 - 14796 mRNA_6428 0.45 1.5
781,097 - 14796 mRNA_6428 0.49 1.5
781,104 + 14796 mRNA_6428 0.49 0.2
781,126 + 14796 mRNA_6428 0.50 0.7
781,245 + 14796 mRNA_6428 0.53 1.1
781,261 + 14796 mRNA_6428 0.53 2.5
781,261 + 14796 mRNA_6428 0.53 3.0
781,443 + 14796 mRNA_6428 0.58 2.2
781,536 + 14796 mRNA_6428 0.61 1.0
781,548 + 14796 mRNA_6428 0.61 -0.1
781,567 - 14796 mRNA_6428 0.61 -0.1
781,573 + 14796 mRNA_6428 0.62 1.5
781,606 + 14796 mRNA_6428 0.62 -0.2
781,661 - 14796 mRNA_6428 0.64 -0.2
781,701 - 14796 mRNA_6428 0.65 -1.2
781,795 - 14796 mRNA_6428 0.67 0.1
781,888 + 14796 mRNA_6428 0.70 1.8
782,021 - 14796 mRNA_6428 0.73 0.4
782,024 + 14796 mRNA_6428 0.73 -0.2
782,143 + 14796 mRNA_6428 0.76 -0.5
782,268 - 14796 mRNA_6428 0.79 0.2
782,387 + 14796 mRNA_6428 0.82 1.8
782,389 - 14796 mRNA_6428 0.83 1.1
782,428 - 14796 mRNA_6428 0.84 0.2
783,050 - 1.4
783,168 - 0.6
783,195 - -0.1
783,295 - 0.6
783,483 - -0.4
783,489 + 0.6
783,500 + 0.6
783,601 - -1.0
783,618 + 1.3
783,628 + 0.0
783,630 - 0.3
783,632 - 0.2
783,639 + -0.9
783,640 + -0.4
783,647 + 0.2
783,664 + -0.5
783,664 + -0.7
783,674 + 0.4
783,676 - 0.4
783,679 + 0.5
783,701 + 0.5
783,777 - 1.1
783,812 - -2.9
783,924 - 0.5
783,947 - 0.4
783,949 - -0.6
783,954 + 2.1
783,979 + -0.1
783,988 - 0.1
784,012 - 1.2
784,055 + 0.5