Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6420

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6419: 14787 - KOG0744 AAA+-type ATPase, at 761703 to 763959 14787 mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788 mRNA_6421: 14789 - SUPERFAMILY--SSF82199, at 765271 to 766029 14789 mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766030 to 767975 14790

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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763,378 + 14787 mRNA_6419 0.74 0.1
763,897 + 1.4
763,981 + 0.0
764,519 + 14788 mRNA_6420 0.47 0.8
764,569 + 14788 mRNA_6420 0.52 0.1
764,829 - 14788 mRNA_6420 0.78 0.3
765,008 - 2.0
765,014 + -0.2
765,047 - 0.1
765,100 - 0.9
765,101 - 0.3
765,124 - 1.0
765,129 + -0.9
765,131 - 2.2
765,132 - 1.0
765,141 - 0.2
765,155 + 0.0
765,251 + 0.0
765,289 + -0.1
765,402 - 14789 mRNA_6421 0.17 0.9
765,561 - 14789 mRNA_6421 0.38 0.2
765,684 + 14789 mRNA_6421 0.54 -0.6
765,722 + 14789 mRNA_6421 0.59 -0.3