Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6363

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6362: 14730 - SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 638595 to 641031 14730 mRNA_6363: 14731 - K14553 UTP18 U3 small nucleolar RNA-associated protein 18, at 641098 to 643745 14731 mRNA_6364: 14732 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 643685 to 645198 14732

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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640,205 - 14730 mRNA_6362 0.66 1.9
640,351 - 14730 mRNA_6362 0.72 0.3
640,479 + 14730 mRNA_6362 0.77 0.5
640,515 - 14730 mRNA_6362 0.79 -0.6
640,520 + 14730 mRNA_6362 0.79 0.4
640,694 - 14730 mRNA_6362 0.86 -0.2
640,971 + 1.3
643,426 + 14731 mRNA_6363 0.88 -0.4
643,428 + 14731 mRNA_6363 0.88 1.2
643,448 - 14731 mRNA_6363 0.89 -0.6
644,012 - 14732 mRNA_6364 0.22 0.1
644,412 - 14732 mRNA_6364 0.48 1.6
644,571 - 14732 mRNA_6364 0.59 -0.9