Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6355

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6354: 14722 - BLAST Mei2p [Pneumocystis carinii], at 616864 to 619118 14722 mRNA_6355: 14723 - KOG4532 WD40-like repeat containing protein, at 619648 to 622272 14723 mRNA_6356: 14724 - K01477 alc, ALLC allantoicase, at 622458 to 625058 14724

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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619,506 - -0.3
619,815 + 0.9
619,978 + 14723 mRNA_6355 0.13 -2.3
619,979 - 14723 mRNA_6355 0.13 -0.9
620,112 + 14723 mRNA_6355 0.18 2.0
620,116 - 14723 mRNA_6355 0.18 -0.1
620,861 + 14723 mRNA_6355 0.46 0.7
620,880 - 14723 mRNA_6355 0.47 2.1
621,009 + 14723 mRNA_6355 0.52 -0.3
621,459 + 14723 mRNA_6355 0.69 1.0
621,609 - 14723 mRNA_6355 0.75 0.5
621,877 + 14723 mRNA_6355 0.85 2.9
622,314 - 1.3
622,329 - -0.5
622,329 - 0.5
622,340 + 2.9
622,368 + 1.3
622,369 - -1.5
622,935 - 14724 mRNA_6356 0.18 -0.1
623,229 - 14724 mRNA_6356 0.30 0.7