Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6335

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6334: 14702 - Hypothetical Protein, at 573693 to 575624 14702 mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576114 to 577521 14703 mRNA_6336: 14704 - K14773 UTP23 U3 small nucleolar RNA-associated protein 23, at 577858 to 579187 14704

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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575,144 - 14702 mRNA_6334 0.75 -1.9
575,255 + 14702 mRNA_6334 0.81 -0.3
575,390 + 14702 mRNA_6334 0.88 0.7
575,565 - -1.0
575,679 - 0.7
575,708 - 1.5
575,858 + 0.6
575,991 - -1.4
575,997 - 0.9
576,262 - 14703 mRNA_6335 0.11 -1.3
576,595 - 14703 mRNA_6335 0.34 1.6
576,650 - 14703 mRNA_6335 0.38 1.9
576,735 - 14703 mRNA_6335 0.44 -0.5
576,743 + 14703 mRNA_6335 0.45 0.3
576,889 - 14703 mRNA_6335 0.55 2.2
576,909 - 14703 mRNA_6335 0.56 -0.1
576,915 + 14703 mRNA_6335 0.57 -0.6
577,141 - 14703 mRNA_6335 0.73 1.5
577,458 - 1.7
577,466 + 1.7
577,485 - -0.2
577,617 - 0.1
577,622 - 0.2
577,755 - -0.6
577,762 - 3.3
577,762 - 0.5
577,762 - 0.1
577,765 + 0.9
577,768 - 0.9