Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6262

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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384,188 + 14629 mRNA_6261 0.73 -0.9
384,494 - 0.1
384,502 - 0.4
384,654 - 0.5
384,686 - -0.5
384,779 - 2.0
384,801 - 3.2
384,803 - -0.8
384,812 + 0.3
384,823 - 1.3
384,848 - -0.0
384,850 - -0.4
384,867 + 1.7
384,877 - 1.8
384,883 - 1.8
384,893 - 1.6
384,894 - 0.3
384,897 + 1.4
384,897 + 1.7
384,899 + 0.8
384,900 + 2.4
384,905 - 1.1
384,933 + 2.2
384,934 - -0.4
384,934 - 0.5
384,939 + 2.1
384,940 - 0.0
384,940 - 0.1
384,946 + -0.5
384,955 + -0.0
384,964 - -0.8
384,976 + 1.3
384,983 - 0.6
384,993 - 1.1
385,074 - 0.9
385,079 - 0.9
385,080 + 1.7
385,087 - 1.3
385,091 + 0.8
385,092 - 0.1
385,186 + -0.4
385,217 + 0.2
385,257 - 1.2
385,276 + 0.0
385,297 - 0.7
385,329 - 1.4
385,332 + 0.3
385,363 - 0.4
385,389 - 0.8
385,394 - 1.3
385,401 - 1.1
385,558 + 14630 mRNA_6262 0.14 0.9
385,671 - 14630 mRNA_6262 0.17 -3.8
385,682 + 14630 mRNA_6262 0.18 0.8
385,812 - 14630 mRNA_6262 0.22 2.3
385,928 + 14630 mRNA_6262 0.25 -0.9
385,989 + 14630 mRNA_6262 0.27 -0.3
385,995 + 14630 mRNA_6262 0.27 -0.4
386,007 - 14630 mRNA_6262 0.28 0.5
386,055 - 14630 mRNA_6262 0.29 1.5
386,263 - 14630 mRNA_6262 0.35 0.3
386,275 - 14630 mRNA_6262 0.36 -0.2
386,279 - 14630 mRNA_6262 0.36 1.9
386,537 + 14630 mRNA_6262 0.43 0.5
386,832 - 14630 mRNA_6262 0.52 -0.0
387,021 + 14630 mRNA_6262 0.58 0.7
387,559 - 14630 mRNA_6262 0.74 0.3
387,704 + 14630 mRNA_6262 0.79 1.4
387,844 - 14630 mRNA_6262 0.83 1.8
387,873 - 14630 mRNA_6262 0.84 1.9
388,028 + 14630 mRNA_6262 0.88 -0.1
388,129 - 1.1
388,420 + -0.8
388,553 - 1.2
388,577 - 4.4
388,610 - -0.9
388,620 + -0.7
388,737 + 1.2
388,739 - 0.3
388,824 - 0.3
388,849 + 1.0
388,880 - -0.6
389,000 - -0.5
389,015 + -3.1
389,022 + 1.1
389,026 - 1.1
389,027 + -0.7
389,147 + 0.3