Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6192

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559 mRNA_6192: 14560 - Hypothetical Protein, at 219520 to 220950 14560 mRNA_6193: 14561 - Hypothetical Protein, at 221060 to 222668 14561

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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218,752 + 1.0
219,011 - 0.3
219,135 + -1.9
219,142 - 1.5
219,151 + 2.4
219,156 + -0.5
219,157 - 0.5
219,161 - 0.0
219,161 - -0.0
219,175 - 0.0
219,179 + 0.2
219,188 + 1.8
219,210 - 2.2
219,216 + -0.7
219,228 + 0.6
219,229 + -0.4
219,232 + 0.6
219,288 + 0.6
219,290 + 0.0
219,320 - -1.5
219,328 + 1.5
219,486 + 0.4
219,617 - 1.4
219,654 - -0.4
219,664 + 14560 mRNA_6192 0.10 -1.4
219,775 + 14560 mRNA_6192 0.18 0.8
219,795 - 14560 mRNA_6192 0.19 0.9
220,359 - 14560 mRNA_6192 0.59 -1.1
220,407 + 14560 mRNA_6192 0.62 1.5
220,931 - 0.7
220,942 + 0.4
221,000 + 0.3
221,130 - 0.2
221,235 - 14561 mRNA_6193 0.11 -0.0
221,246 + 14561 mRNA_6193 0.12 1.0
221,496 - 14561 mRNA_6193 0.27 0.9
221,814 + 14561 mRNA_6193 0.47 0.8