Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6144

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6144: 14512 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 113146 to 115077 14512 mRNA_6145: 14513 - HMMPfam-Protein of unknown function (DUF2456)-PF10445, at 115513 to 116915 14513

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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112,187 - 0.6
112,188 + -0.3
112,192 - 1.0
112,244 + -0.4
112,283 - -2.1
112,368 - 0.1
112,378 - 0.4
112,382 - -0.8
112,383 - 1.6
112,388 + -0.1
112,477 - -0.3
112,479 + 0.0
112,496 - 0.2
112,510 + 0.7
112,512 - 0.5
112,519 + 1.6
112,547 + -0.1
112,549 - -0.6
112,561 - -0.3
112,565 + 0.3
112,568 + 2.0
112,571 + -0.6
112,601 + 0.4
112,622 - 0.2
112,632 + -0.6
112,736 + -1.1
112,741 - 0.3
112,741 - 1.6
112,741 - 0.7
112,748 + -0.0
112,759 + 0.4
112,760 + 0.0
112,774 + 1.2
112,918 - 1.0
113,048 - 0.9
113,085 - 0.5
113,085 - -1.3
113,678 + 14512 mRNA_6144 0.28 0.2
113,757 - 14512 mRNA_6144 0.32 0.4
113,945 - 14512 mRNA_6144 0.41 -0.1
114,101 - 14512 mRNA_6144 0.49 -0.4
114,958 + 2.5
115,135 - 0.5
115,298 + -4.2
115,400 + 0.2
115,794 - 14513 mRNA_6145 0.20 -0.1
115,922 + 14513 mRNA_6145 0.29 -0.7
116,022 - 14513 mRNA_6145 0.36 1.5