Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6109

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6109: 14477 - KOG1477 SPRY domain-containing proteins, at 12198 to 14626 14477 mRNA_6110: 14478 - Hypothetical Protein, at 15067 to 15769 14478

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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11,235 - 0.5
11,402 + 1.0
11,634 - 1.8
12,059 + 0.6
12,218 + -1.2
12,415 + 0.4
12,450 + 14477 mRNA_6109 0.10 -0.8
12,638 + 14477 mRNA_6109 0.18 -0.7
12,767 + 14477 mRNA_6109 0.23 0.5
13,069 - 14477 mRNA_6109 0.36 1.7
13,367 + 14477 mRNA_6109 0.48 0.3
13,520 + 14477 mRNA_6109 0.54 0.5
13,649 - 14477 mRNA_6109 0.60 0.6
13,815 - 14477 mRNA_6109 0.67 1.1
13,929 - 14477 mRNA_6109 0.71 0.0
13,983 - 14477 mRNA_6109 0.73 0.4
14,377 + 14477 mRNA_6109 0.90 0.6
14,420 + 0.7
14,518 - 1.9
14,520 + 0.4
14,652 + -1.6
14,654 - 1.5
14,676 + 1.3
14,687 + 0.8
14,782 - 1.6
14,806 - 1.1
14,921 + 0.6
14,942 - 0.1
14,949 + 0.4
14,979 - 1.7
14,986 - 1.1
15,116 - 1.4
15,117 + 0.4
15,118 + -0.3
15,130 + 0.5
15,245 - 14478 mRNA_6110 0.25 -0.3
15,256 + 14478 mRNA_6110 0.27 -0.3
15,281 - 14478 mRNA_6110 0.30 -1.4
15,308 + 14478 mRNA_6110 0.34 -1.5
15,311 + 14478 mRNA_6110 0.35 1.6
15,544 - 14478 mRNA_6110 0.68 0.0