Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5967

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5966: 14334 - KOG1950 Glycosyl transferase, family 8 - glycogenin, at 1346683 to 1347941 14334 mRNA_5967: 14335 - Hypothetical Protein, at 1348034 to 1349199 14335 mRNA_5968: 14336 - Hypothetical Protein, at 1349496 to 1350670 14336

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,347,187 - 14334 mRNA_5966 0.40 -0.2
1,347,380 + 14334 mRNA_5966 0.55 1.0
1,347,520 - 14334 mRNA_5966 0.66 -0.8
1,348,047 + 0.3
1,348,095 - 0.1
1,348,240 - 14335 mRNA_5967 0.18 -1.5
1,348,262 - 14335 mRNA_5967 0.20 -0.2
1,348,278 + 14335 mRNA_5967 0.21 -0.5
1,348,422 + 14335 mRNA_5967 0.33 -0.1
1,348,524 + 14335 mRNA_5967 0.42 -0.0
1,348,691 + 14335 mRNA_5967 0.56 0.8
1,348,706 + 14335 mRNA_5967 0.58 -0.1
1,348,737 - 14335 mRNA_5967 0.60 2.2
1,349,006 - 14335 mRNA_5967 0.83 0.2
1,349,638 - 14336 mRNA_5968 0.12 -0.7
1,349,846 - 14336 mRNA_5968 0.30 2.0
1,349,875 + 14336 mRNA_5968 0.32 0.1
1,349,908 + 14336 mRNA_5968 0.35 1.3
1,350,018 - 14336 mRNA_5968 0.44 0.8
1,350,038 + 14336 mRNA_5968 0.46 -0.6