Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5866

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1117097 to 1118879 14233 mRNA_5866: 14234 - KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily), at 1119164 to 1122161 14234 mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1122384 to 1123037 14235

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,118,367 - 14233 mRNA_5865 0.71 0.6
1,118,483 - 14233 mRNA_5865 0.78 0.2
1,118,495 - 14233 mRNA_5865 0.78 1.4
1,119,040 - -0.4
1,119,370 + -0.6
1,119,373 + 1.1
1,119,384 + 0.7
1,119,829 + 14234 mRNA_5866 0.22 0.9
1,119,943 + 14234 mRNA_5866 0.26 1.2
1,120,115 - 14234 mRNA_5866 0.32 2.4
1,120,243 + 14234 mRNA_5866 0.36 0.8
1,120,258 - 14234 mRNA_5866 0.36 0.6
1,120,559 - 14234 mRNA_5866 0.47 0.4
1,121,428 + 14234 mRNA_5866 0.76 1.0
1,121,445 - 14234 mRNA_5866 0.76 0.8
1,121,726 + 14234 mRNA_5866 0.85 -0.1
1,121,887 - 0.1
1,122,196 + 0.5
1,122,198 + 0.1
1,122,199 + 0.3
1,122,200 - 0.3
1,122,213 + -0.6
1,122,330 + 0.0
1,122,342 - -1.3
1,122,351 + -0.0
1,123,071 - 2.3
1,123,079 - 1.5
1,123,088 - 1.5