Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5843

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5842: 14210 - K04508 TBL1 transducin (beta)-like 1, at 1064235 to 1067284 14210 mRNA_5843: 14211 - HMMPfam-Tim10/DDP family zinc finger-PF02953, at 1067575 to 1068136 14211 mRNA_5844: 14212 - HMMPfam-Cation efflux family-PF01545,SUPERFAMILY--SSF160240,SUPERFAMILY--SSF161111, at 1068460 to 1070269 14212

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,066,788 - 14210 mRNA_5842 0.84 -0.8
1,066,802 + 14210 mRNA_5842 0.84 1.4
1,066,832 - 14210 mRNA_5842 0.85 -0.1
1,067,816 + 14211 mRNA_5843 0.43 0.2
1,067,823 + 14211 mRNA_5843 0.44 1.6
1,067,844 + 14211 mRNA_5843 0.48 2.7
1,067,852 + 14211 mRNA_5843 0.49 1.1
1,067,943 - 14211 mRNA_5843 0.65 0.7
1,067,986 - 14211 mRNA_5843 0.73 -1.6
1,067,992 - 14211 mRNA_5843 0.74 0.8
1,068,454 + -0.8
1,068,574 + -0.7
1,068,721 + 14212 mRNA_5844 0.14 1.3
1,068,984 + 14212 mRNA_5844 0.29 2.8