Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5807

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980969 to 985772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986328 to 987350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987558 to 988212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988329 to 990216 14177

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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985,896 + 1.0
985,987 - 0.3
986,003 + -0.6
986,106 - -0.1
986,121 + 0.1
986,125 - 0.4
986,125 - 0.2
986,126 - 0.6
986,131 + -0.7
986,131 - 0.2
986,138 + 0.8
986,144 - 1.7
986,144 - -0.2
986,150 - 1.4
986,154 + 1.1
986,158 + 0.2
986,161 - -0.7
986,161 + 1.9
986,261 + 1.9
986,267 - 0.6
986,270 + 0.4
986,271 - 0.4
986,271 + 0.8
986,272 - 0.7
986,275 - 1.5
986,295 + 0.1
986,296 - 1.9
986,300 + 0.3
986,301 + 0.6
986,456 + 14175 mRNA_5807 0.13 -0.6
987,044 - 14175 mRNA_5807 0.70 0.7
987,317 + 0.2
987,326 + 0.1
987,333 + 1.1
987,468 + 2.1
987,474 + 2.1
987,508 + -1.7
987,888 - 14176 mRNA_5808 0.50 -0.6
987,905 + 14176 mRNA_5808 0.53 -0.8
988,185 + 0.3
988,185 + -0.4
988,206 + -1.1
988,329 + 0.2