Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5790

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5789: 14157 - KOG2859 DNA repair protein, member of the recA/RAD51 family, at 944648 to 945829 14157 mRNA_5790: 14158 - K01054 MGLL acylglycerol lipase, at 945926 to 947446 14158 mRNA_5791: 14159 - K15115 SLC25A32, MFT solute carrier family 25 (mitochondrial folate transporter), member 32, at 947999 to 949301 14159

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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945,101 + 14157 mRNA_5789 0.38 0.2
945,139 - 14157 mRNA_5789 0.42 0.1
945,186 - 14157 mRNA_5789 0.46 -0.0
945,252 + 14157 mRNA_5789 0.51 0.9
945,329 + 14157 mRNA_5789 0.58 0.0
945,390 + 14157 mRNA_5789 0.63 -1.7
945,579 + 14157 mRNA_5789 0.79 0.7
945,596 - 14157 mRNA_5789 0.80 -0.4
945,689 - 14157 mRNA_5789 0.88 1.1
945,741 - -0.5
945,745 - 0.1
945,750 - -0.0
946,005 - -1.7
946,033 + 0.6
946,163 - 14158 mRNA_5790 0.16 -0.4
946,196 + 14158 mRNA_5790 0.18 -1.8
946,604 - 14158 mRNA_5790 0.45 0.6
946,774 + 14158 mRNA_5790 0.56 1.3
946,792 - 14158 mRNA_5790 0.57 -0.5
946,895 + 14158 mRNA_5790 0.64 0.7
947,081 - 14158 mRNA_5790 0.76 -0.8
947,087 + 14158 mRNA_5790 0.76 -0.5
947,097 + 14158 mRNA_5790 0.77 0.1
947,183 + 14158 mRNA_5790 0.83 1.0
947,208 + 14158 mRNA_5790 0.84 1.9
947,321 + 2.0
947,468 - -0.6
947,468 - 1.9
947,469 - -0.1
947,483 + 0.2
947,485 + 0.1
947,485 - 2.4
947,609 - 0.1
947,611 - 2.1
947,622 + -0.4
947,773 + 0.3
947,921 - 0.2
947,950 - 1.8