Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5755

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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867,691 - 0.6
867,713 + 1.0
867,722 + -0.4
867,727 - -0.2
867,731 + -0.2
867,741 - 1.5
867,741 - 1.8
867,742 + 1.0
867,742 + 0.4
867,745 + -0.6
867,746 + -0.3
867,749 + 0.0
867,750 - 1.2
867,762 - 0.6
867,766 - 2.0
867,769 + -1.2
867,880 + 2.1
867,906 + 2.7
868,162 + 1.0
868,173 - 2.3
868,203 + 0.4
868,617 + 1.5
868,777 + 2.0
868,793 + 0.7
868,796 - -0.7
868,921 + 14123 mRNA_5755 0.14 0.5
868,925 - 14123 mRNA_5755 0.14 0.5
868,927 + 14123 mRNA_5755 0.14 -0.3
868,943 - 14123 mRNA_5755 0.15 -0.5
868,959 + 14123 mRNA_5755 0.16 1.8
868,973 - 14123 mRNA_5755 0.17 0.6
869,086 + 14123 mRNA_5755 0.23 -0.4
869,816 - 14123 mRNA_5755 0.65 -1.1
869,818 - 14123 mRNA_5755 0.65 0.3
869,848 + 14123 mRNA_5755 0.67 0.3
869,983 - 14123 mRNA_5755 0.74 -0.8
870,019 - 14123 mRNA_5755 0.76 -0.8
870,246 - 14123 mRNA_5755 0.90 -0.4
870,268 + -1.3
870,308 - -0.5
870,414 - 1.1
870,535 - -1.3
870,682 - -1.1
870,722 + -0.3
870,724 + 0.1
870,726 + 1.1
870,751 + 0.4
870,787 + 0.2
870,876 + -1.0
870,881 - 1.6
871,154 - 14124 mRNA_5756 0.29 0.8