Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5754

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5753: 14121 - K17267 COPG coatomer subunit gamma, at 860617 to 864021 14121 mRNA_5754: 14122 - KOG1721 FOG Zn-finger, at 864214 to 867057 14122

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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864,013 - -1.1
864,202 - 0.6
864,954 + 14122 mRNA_5754 0.26 -0.2
865,084 - 14122 mRNA_5754 0.31 -0.2
865,215 + 14122 mRNA_5754 0.35 0.7
865,988 + 14122 mRNA_5754 0.62 -1.0
866,081 - 14122 mRNA_5754 0.66 0.3
866,245 - 14122 mRNA_5754 0.71 0.5
866,252 + 14122 mRNA_5754 0.72 -0.0
866,334 + 14122 mRNA_5754 0.75 -2.2
866,845 - 0.3
866,970 + 0.7
866,980 + -1.5
867,005 - -0.3
867,133 + 1.5
867,164 - -1.8
867,270 - 0.3
867,301 + 0.7
867,309 + -0.3
867,310 - 1.6
867,319 - 1.2
867,324 + -0.1
867,431 - -0.1
867,454 - 0.5
867,491 - 1.2
867,505 + 0.7
867,510 - 0.5
867,518 + 0.1
867,619 - 0.6
867,630 - 3.1
867,634 + -1.0
867,635 - 0.6
867,636 - 1.3
867,637 - 2.3
867,638 + 0.2
867,641 + 0.4
867,645 + 0.3
867,647 - 0.7
867,648 - 0.1
867,650 + 1.0
867,651 - 1.2
867,653 - 1.9
867,653 - 1.3
867,655 - 0.8
867,655 - 0.8
867,656 - 0.2
867,657 + 1.7
867,662 + 1.0
867,663 + 0.1
867,663 - 0.5
867,663 + 1.7
867,663 + -0.2
867,664 - -0.3
867,664 + 0.8
867,667 - -0.0
867,668 + 1.7
867,670 + 0.8
867,671 + -0.2
867,674 + 0.2
867,675 - -0.1
867,678 + -0.8
867,691 - 0.6
867,713 + 1.0
867,722 + -0.4
867,727 - -0.2
867,731 + -0.2
867,741 - 1.5
867,741 - 1.8
867,742 + 1.0
867,742 + 0.4
867,745 + -0.6
867,746 + -0.3
867,749 + 0.0
867,750 - 1.2
867,762 - 0.6
867,766 - 2.0
867,769 + -1.2
867,880 + 2.1
867,906 + 2.7