Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5748

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5747: 14115 - HMMPfam-F-box-like-PF12937, at 849321 to 849879 14115 mRNA_5748: 14116 - K12260 SRX1 sulfiredoxin, at 850199 to 850740 14116 mRNA_5749: 14117 - K14863 YTM1, WDR12 ribosome biogenesis protein YTM1, at 850865 to 852979 14117

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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849,219 + -0.0
849,515 - 14115 mRNA_5747 0.35 0.4
849,640 - 14115 mRNA_5747 0.57 -0.7
849,661 - 14115 mRNA_5747 0.61 0.4
849,776 - 14115 mRNA_5747 0.81 -0.1
849,802 + 14115 mRNA_5747 0.86 1.0
849,804 - 14115 mRNA_5747 0.86 -1.7
849,949 - -0.8
849,964 - -0.1
849,969 + 0.6
850,105 + -0.1
850,260 + 14116 mRNA_5748 0.11 -0.5
850,261 - 14116 mRNA_5748 0.11 -1.2
850,263 + 14116 mRNA_5748 0.12 -0.1
850,280 + 14116 mRNA_5748 0.15 0.4
850,291 - 14116 mRNA_5748 0.17 0.4
850,558 - 14116 mRNA_5748 0.66 -1.4
850,567 + 14116 mRNA_5748 0.68 0.7
851,304 + 14117 mRNA_5749 0.21 0.6