Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5718

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086 mRNA_5719: 14087 - K00290 LYS1 saccharopine dehydrogenase (NAD+, L-lysine forming), at 765726 to 767088 14087

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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762,510 - 14085 mRNA_5717 0.67 0.1
762,940 - 14085 mRNA_5717 0.86 2.2
763,063 + 2.2
763,102 + 1.3
763,234 + -0.3
763,967 + 14086 mRNA_5718 0.27 1.2
764,248 - 14086 mRNA_5718 0.41 -0.5
764,250 - 14086 mRNA_5718 0.41 0.8
764,673 + 14086 mRNA_5718 0.62 1.7
764,937 - 14086 mRNA_5718 0.75 -0.8
764,962 - 14086 mRNA_5718 0.76 0.3
765,386 - 1.8
765,508 - 0.2
765,526 - -0.0
765,539 - 0.4
765,544 - 0.4
765,546 - 0.1
765,546 + 1.5
765,550 - -0.3
765,555 + 2.0
765,558 + 0.6
765,559 + 0.5
765,561 - -0.4
765,571 - 0.3
765,574 + -0.3
765,655 - -0.2
765,686 + -1.4
765,686 - 0.1
765,697 - 1.3
765,698 - 0.3
765,698 - 0.0
765,698 - -1.0
765,703 - 0.2
765,705 + -0.0
765,705 + 0.5
765,712 + -0.9
765,717 + -0.6