Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5717

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5716: 14084 - Hypothetical Protein, at 759003 to 760646 14084 mRNA_5717: 14085 - K20524 LSB5 LAS seventeen-binding protein 5, at 760959 to 763265 14085 mRNA_5718: 14086 - SUPERFAMILY--SSF50370, at 763412 to 765448 14086

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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760,159 + 14084 mRNA_5716 0.70 0.0
760,299 + 14084 mRNA_5716 0.79 -0.1
760,455 + 14084 mRNA_5716 0.88 0.3
760,559 - 0.3
760,871 - 1.1
760,872 - 0.1
760,878 + 0.2
760,880 - 1.0
760,882 - -0.8
760,886 + -0.2
760,899 + 3.1
760,899 + 1.1
760,901 + 1.1
761,037 + 1.0
761,041 + 0.3
761,064 - 1.2
761,208 + 14085 mRNA_5717 0.11 2.0
761,322 - 14085 mRNA_5717 0.16 -0.3
761,325 + 14085 mRNA_5717 0.16 0.4
761,327 - 14085 mRNA_5717 0.16 -0.0
761,613 - 14085 mRNA_5717 0.28 0.8
761,793 + 14085 mRNA_5717 0.36 1.1
761,936 + 14085 mRNA_5717 0.42 1.2
762,366 - 14085 mRNA_5717 0.61 3.1
762,510 - 14085 mRNA_5717 0.67 0.1
762,940 - 14085 mRNA_5717 0.86 2.2
763,063 + 2.2
763,102 + 1.3
763,234 + -0.3
763,967 + 14086 mRNA_5718 0.27 1.2
764,248 - 14086 mRNA_5718 0.41 -0.5
764,250 - 14086 mRNA_5718 0.41 0.8