Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5673

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5672: 14040 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 661581 to 662502 14040 mRNA_5673: 14041 - Hypothetical Protein, at 663280 to 665489 14041 mRNA_5674: 14042 - K14560 IMP3 U3 small nucleolar ribonucleoprotein protein IMP3, at 666180 to 667115 14042

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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662,521 - -0.1
662,725 + 0.9
662,809 + 1.3
662,823 + -0.3
662,827 + -0.0
662,848 - 1.5
662,854 + -1.4
662,894 - 1.3
662,920 + 0.3
662,922 - 0.8
662,928 + -0.6
662,944 - 1.6
662,991 + -0.6
662,992 - 0.1
662,998 + 0.3
663,005 + 1.6
663,007 + 0.2
663,008 + 1.3
663,011 + 1.0
663,016 + 0.8
663,021 - 0.5
663,067 + 0.0
663,073 + 0.7
663,183 + -0.3
663,330 + -0.2
663,730 - 14041 mRNA_5673 0.20 1.2
664,070 + 14041 mRNA_5673 0.36 1.4
664,217 - 14041 mRNA_5673 0.42 0.2
664,619 + 14041 mRNA_5673 0.61 0.1
664,763 + 14041 mRNA_5673 0.67 1.1
664,794 - 14041 mRNA_5673 0.69 -1.2
665,075 - 14041 mRNA_5673 0.81 -3.3
665,347 + -0.1
665,357 + -1.2
665,444 + 0.2
665,583 - -0.1
665,634 + 0.5
665,760 + 2.4
665,886 + 1.3
665,902 + 2.4
666,050 - 1.2
666,065 - 0.4