Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5666

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5665: 14033 - K15083 RAD16 DNA repair protein RAD16, at 634205 to 636873 14033 mRNA_5666: 14034 - Hypothetical Protein, at 637260 to 638584 14034

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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636,308 + 14033 mRNA_5665 0.79 -1.1
636,470 + 14033 mRNA_5665 0.85 -0.1
636,595 + 14033 mRNA_5665 0.90 -1.4
636,599 + 14033 mRNA_5665 0.90 2.4
636,752 + 0.4
637,034 - 0.3
637,064 + -0.1
637,165 - 0.1
637,167 - 0.8
637,180 + -0.5
637,180 + 0.6
637,180 + 1.5
637,180 + 0.4
637,180 + 0.4
637,181 + -0.4
637,182 - -1.5
637,182 + 1.6
637,183 + -0.5
637,183 - 0.2
637,196 - 0.9
637,335 + -0.5
637,354 - 1.6
637,359 - 0.1
637,360 - 1.5
637,412 - 14034 mRNA_5666 0.11 0.2
637,466 + 14034 mRNA_5666 0.16 0.3
637,487 - 14034 mRNA_5666 0.17 1.1
637,493 - 14034 mRNA_5666 0.18 -0.1
637,513 + 14034 mRNA_5666 0.19 0.5
637,596 + 14034 mRNA_5666 0.25 1.2
637,654 + 14034 mRNA_5666 0.30 0.4
638,037 - 14034 mRNA_5666 0.59 -0.5
638,064 + 14034 mRNA_5666 0.61 -0.2
638,220 - 14034 mRNA_5666 0.72 -0.1
638,256 + 14034 mRNA_5666 0.75 1.7
638,261 - 14034 mRNA_5666 0.76 -0.3
638,657 - -0.2
638,928 + -0.1
638,948 + -0.5
638,952 + 1.4
638,957 + 0.5
638,968 - 0.7
639,249 - 0.0
639,440 - -1.9
639,530 - 1.5