Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5600

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5599: 13967 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 475591 to 478385 13967 mRNA_5600: 13968 - BLAST polysaccharide lyase family 14 protein [Sistotremastr..., at 479032 to 480783 13968 mRNA_5601: 13969 - K15014 SLC29A1_2_3, ENT1_2_3 solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3, at 481051 to 483053 13969

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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478,137 - -0.4
478,453 - -1.0
478,491 - 0.8
478,718 + 2.0
478,867 - 1.4
478,874 - 1.2
479,518 + 13968 mRNA_5600 0.28 1.2
479,736 - 13968 mRNA_5600 0.40 -1.0
479,744 + 13968 mRNA_5600 0.41 1.0
479,765 + 13968 mRNA_5600 0.42 -0.0
479,790 + 13968 mRNA_5600 0.43 -0.3
479,885 + 13968 mRNA_5600 0.49 0.3
480,032 - 13968 mRNA_5600 0.57 -0.2
480,195 + 13968 mRNA_5600 0.66 -0.3
480,211 - 13968 mRNA_5600 0.67 0.3
480,339 - 13968 mRNA_5600 0.75 0.4
480,357 + 13968 mRNA_5600 0.76 -0.8
480,522 + 13968 mRNA_5600 0.85 1.6
480,649 - 1.2
480,659 + 1.9
480,791 + 2.7