Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5597

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762 13964 mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822 13965 mRNA_5598: 13966 - KOG0118 FOG RRM domain, at 474328 to 475458 13966

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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472,120 - -0.2
472,134 + 0.4
472,135 + 1.5
472,155 + 0.3
472,172 + 0.3
472,187 - 0.6
472,188 + -1.1
472,309 - 1.9
472,362 - 1.3
472,367 - 0.0
472,380 + 1.1
472,381 + -0.0
472,387 + 1.5
472,389 + 1.7
472,395 + -0.2
472,395 - 1.2
472,404 + 0.4
472,405 + -0.8
472,406 - 0.1
472,416 + -0.7
472,535 - 0.0
472,572 - 3.0
472,694 - 0.2
472,833 - 13965 mRNA_5597 0.16 1.4
472,845 + 13965 mRNA_5597 0.17 1.1
473,242 - 13965 mRNA_5597 0.51 0.8
473,258 + 13965 mRNA_5597 0.52 0.2
473,450 - 13965 mRNA_5597 0.68 0.4
474,411 - -0.5