Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5567

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5566: 13934 - Hypothetical Protein, at 393012 to 395471 13934 mRNA_5567: 13935 - K14394 ACP1 low molecular weight phosphotyrosine protein phosphatase, at 395599 to 396422 13935 mRNA_5568: 13936 - Hypothetical Protein, at 396764 to 397075 13936

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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394,821 - 13934 mRNA_5566 0.74 0.9
394,849 + 13934 mRNA_5566 0.75 0.4
395,212 - 13934 mRNA_5566 0.89 1.8
395,307 - -0.7
395,313 + -0.9
395,575 + -0.9
395,624 - -0.5
395,742 + 13935 mRNA_5567 0.17 -0.8
395,762 + 13935 mRNA_5567 0.20 -0.3
395,866 - 13935 mRNA_5567 0.32 1.1
396,022 - 13935 mRNA_5567 0.51 -0.5
396,281 - 13935 mRNA_5567 0.83 -0.2
396,289 - 13935 mRNA_5567 0.84 1.9
396,444 + -0.4
396,444 - 0.0
396,461 - 1.1
396,468 - 0.5
396,473 - 1.0
396,476 - 0.8
396,486 + -0.6
396,505 - -0.7
396,507 + -0.1
396,521 - 0.5
396,619 - -0.4
396,781 + 0.4
396,782 + -0.0
396,927 - 13936 mRNA_5568 0.52 -0.6
397,169 - 0.3
397,209 + 0.4
397,220 - 0.1
397,324 - 1.1
397,343 - -0.2
397,346 + -1.7
397,347 + -0.2
397,371 - 1.5