Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5516

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275180 to 276108 13883 mRNA_5516: 13884 - Hypothetical Protein, at 276264 to 277474 13884

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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276,177 - -0.1
276,177 - -1.2
276,199 + 2.1
276,230 - 0.4
276,331 + 0.7
276,361 - 0.8
276,382 - -0.3
276,639 + 13884 mRNA_5516 0.31 0.0
276,906 - 13884 mRNA_5516 0.53 1.1
276,912 - 13884 mRNA_5516 0.54 1.1
276,920 + 13884 mRNA_5516 0.54 -0.3
277,142 + 13884 mRNA_5516 0.73 1.7
277,210 + 13884 mRNA_5516 0.78 -0.3
277,233 - 13884 mRNA_5516 0.80 -1.9
277,357 + 0.6
277,492 + -0.3
277,514 - 0.7
277,775 - 0.8
277,933 - -1.2
278,228 + 0.3
278,232 + 0.3
278,342 + 0.5
278,352 + 0.6
278,379 - 1.6