Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5450

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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117,966 + 13817 mRNA_5449 0.51 -0.2
117,972 + 13817 mRNA_5449 0.51 1.0
118,025 - 13817 mRNA_5449 0.56 -1.0
118,074 - 13817 mRNA_5449 0.60 2.1
118,099 + 13817 mRNA_5449 0.63 -2.0
118,263 + 13817 mRNA_5449 0.78 -1.8
118,367 - 13817 mRNA_5449 0.87 0.8
118,375 - 13817 mRNA_5449 0.88 -0.4
118,392 + 13817 mRNA_5449 0.89 0.9
118,395 - 13817 mRNA_5449 0.90 0.6
118,395 - 13817 mRNA_5449 0.90 0.2
118,395 - 13817 mRNA_5449 0.90 0.7
118,401 + 0.0
118,488 - 0.5
118,489 + 0.4
118,831 - 0.2
118,836 + 0.6
118,936 + 0.6
119,291 + 13818 mRNA_5450 0.19 0.3
119,583 - 13818 mRNA_5450 0.31 -2.8
119,721 - 13818 mRNA_5450 0.37 -0.4
119,901 - 13818 mRNA_5450 0.44 1.1
120,138 - 13818 mRNA_5450 0.54 0.1
120,338 - 13818 mRNA_5450 0.62 0.2
120,605 + 13818 mRNA_5450 0.73 0.5
120,775 + 13818 mRNA_5450 0.80 -0.5
120,931 + 13818 mRNA_5450 0.87 1.2
121,143 - 1.1
121,201 - -0.6
121,226 + 1.2
121,317 + -0.3
121,539 - 0.5
121,770 - 0.6
121,785 + -0.1
121,938 + 0.9
122,078 - -1.2
122,080 + -1.4
122,093 - 1.3
122,096 - -1.2
122,116 - -1.1