Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5441

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5440: 13808 - Hypothetical Protein, at 101462 to 101965 13808 mRNA_5441: 13809 - Hypothetical Protein, at 102174 to 103025 13809 mRNA_5442: 13810 - HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708, at 103873 to 106982 13810

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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101,374 + -1.0
101,447 - -1.1
101,471 + -0.1
101,490 - -0.1
102,098 + 0.7
102,110 + 3.2
102,113 - -1.6
102,113 - 0.2
102,113 - 0.2
102,113 - 0.1
102,125 - -2.4
102,135 - -1.8
102,270 - 13809 mRNA_5441 0.11 0.5
102,271 + 13809 mRNA_5441 0.11 -0.0
102,364 - 13809 mRNA_5441 0.22 1.7
102,390 + 13809 mRNA_5441 0.25 1.1
102,465 + 13809 mRNA_5441 0.34 0.8
102,771 - 13809 mRNA_5441 0.70 0.1
102,791 + 13809 mRNA_5441 0.72 0.3
102,817 + 13809 mRNA_5441 0.75 0.3
102,822 + 13809 mRNA_5441 0.76 0.3
103,248 + 0.6
103,256 - 2.1
103,291 - 1.2
103,377 + 3.1
103,560 + -0.8
103,664 + 0.7
103,832 - 0.7