Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5366

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5365: 13733 - K00107 ALO D-arabinono-1,4-lactone oxidase, at 548401 to 550040 13733 mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550518 to 551881 13734 mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552284 to 555242 13735

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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549,536 + 13733 mRNA_5365 0.69 2.1
549,647 - 13733 mRNA_5365 0.76 -0.1
549,675 - 13733 mRNA_5365 0.78 0.1
549,678 + 13733 mRNA_5365 0.78 0.3
549,963 - -0.7
549,968 + 0.9
549,970 - 2.0
550,095 + 0.1
550,101 + 1.0
550,134 + -0.8
550,370 + 2.3
550,378 - -0.3
550,389 - 1.8
550,391 - 1.2
550,835 + 13734 mRNA_5366 0.23 -1.2
551,274 + 13734 mRNA_5366 0.55 -0.8
551,410 + 13734 mRNA_5366 0.65 -0.6
551,890 - -0.5
552,027 - 1.1
552,167 - 2.0
552,287 + 0.4
552,542 - 0.1
552,616 + 13735 mRNA_5367 0.11 1.2
552,625 - 13735 mRNA_5367 0.12 0.9
552,678 - 13735 mRNA_5367 0.13 -1.0