Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5365

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5364: 13732 - KOG1630 Growth hormone-induced protein and related proteins, at 546685 to 547952 13732 mRNA_5365: 13733 - K00107 ALO D-arabinono-1,4-lactone oxidase, at 548401 to 550040 13733 mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550518 to 551881 13734

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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547,405 - 13732 mRNA_5364 0.57 0.4
547,421 + 13732 mRNA_5364 0.58 1.9
547,428 + 13732 mRNA_5364 0.59 -0.5
547,666 - 13732 mRNA_5364 0.77 0.3
547,694 - 13732 mRNA_5364 0.80 -0.7
547,706 + 13732 mRNA_5364 0.81 0.9
547,746 + 13732 mRNA_5364 0.84 0.7
547,837 - 0.4
547,849 - 0.2
547,866 + 0.4
547,878 - 1.0
547,884 + -0.5
548,018 - 0.1
548,025 - 0.6
548,026 - -0.2
548,036 - 0.3
548,037 - 1.9
548,092 - 0.8
548,477 - 1.1
548,489 + -0.0
548,499 + -2.9
548,772 + 13733 mRNA_5365 0.23 0.1
548,772 - 13733 mRNA_5365 0.23 -0.0
548,790 - 13733 mRNA_5365 0.24 -1.2
549,261 + 13733 mRNA_5365 0.52 -0.3
549,316 - 13733 mRNA_5365 0.56 0.4
549,358 + 13733 mRNA_5365 0.58 3.8
549,395 + 13733 mRNA_5365 0.61 3.2
549,536 + 13733 mRNA_5365 0.69 2.1
549,647 - 13733 mRNA_5365 0.76 -0.1
549,675 - 13733 mRNA_5365 0.78 0.1
549,678 + 13733 mRNA_5365 0.78 0.3
549,963 - -0.7
549,968 + 0.9
549,970 - 2.0
550,095 + 0.1
550,101 + 1.0
550,134 + -0.8
550,370 + 2.3
550,378 - -0.3
550,389 - 1.8
550,391 - 1.2
550,835 + 13734 mRNA_5366 0.23 -1.2