Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5356

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5355: 13723 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 528970 to 530546 13723 mRNA_5356: 13724 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 531177 to 533794 13724 mRNA_5357: 13725 - HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335, at 533948 to 534977 13725

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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530,182 - 13723 mRNA_5355 0.77 -0.5
530,668 + 0.4
530,818 - -0.7
530,938 + 0.4
530,956 - -0.5
531,075 + 0.1
531,106 + 0.5
531,905 - 13724 mRNA_5356 0.28 0.2
532,766 - 13724 mRNA_5356 0.61 0.5
532,822 - 13724 mRNA_5356 0.63 2.8
532,873 - 13724 mRNA_5356 0.65 1.3
532,874 + 13724 mRNA_5356 0.65 0.2
532,876 - 13724 mRNA_5356 0.65 -1.3
532,887 - 13724 mRNA_5356 0.65 -0.2
532,893 + 13724 mRNA_5356 0.66 -0.4
532,894 - 13724 mRNA_5356 0.66 1.2
532,897 + 13724 mRNA_5356 0.66 -0.1
532,902 + 13724 mRNA_5356 0.66 0.3
532,904 - 13724 mRNA_5356 0.66 1.9
532,915 + 13724 mRNA_5356 0.66 0.8
532,916 + 13724 mRNA_5356 0.66 0.0
533,038 - 13724 mRNA_5356 0.71 0.5
533,048 + 13724 mRNA_5356 0.71 1.2
533,132 - 13724 mRNA_5356 0.75 2.5
533,218 + 13724 mRNA_5356 0.78 0.2
533,229 - 13724 mRNA_5356 0.78 -0.3
533,236 - 13724 mRNA_5356 0.79 0.8
533,240 + 13724 mRNA_5356 0.79 0.3
533,364 - 13724 mRNA_5356 0.84 -0.2
533,565 + 1.1
533,565 - -0.4
533,648 - 0.5
533,651 - 1.2
533,676 - -0.5
533,833 + -1.3
533,954 - 0.1
534,377 + 13725 mRNA_5357 0.42 1.2
534,442 + 13725 mRNA_5357 0.48 0.6
534,554 + 13725 mRNA_5357 0.59 0.1
534,670 - 13725 mRNA_5357 0.70 1.6
534,688 + 13725 mRNA_5357 0.72 0.4