Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5326

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459771 to 461459 13693 mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461748 to 463259 13694 mRNA_5327: 13695 - Hypothetical Protein, at 463511 to 464845 13695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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461,425 - -0.7
461,809 + 0.5
461,834 - 1.4
461,835 + -0.1
461,961 - 13694 mRNA_5326 0.14 -1.7
462,252 + 13694 mRNA_5326 0.33 -0.5
462,257 - 13694 mRNA_5326 0.34 2.2
462,343 + 13694 mRNA_5326 0.39 -1.2
462,432 - 13694 mRNA_5326 0.45 -0.8
462,537 - 13694 mRNA_5326 0.52 1.0
462,709 + 13694 mRNA_5326 0.64 0.2
462,803 + 13694 mRNA_5326 0.70 -1.1
462,828 + 13694 mRNA_5326 0.71 -0.3
462,853 - 13694 mRNA_5326 0.73 0.3
462,965 - 13694 mRNA_5326 0.80 -0.5
462,999 + 13694 mRNA_5326 0.83 0.7
463,017 + 13694 mRNA_5326 0.84 0.8
463,094 - 13694 mRNA_5326 0.89 0.1
463,135 + 0.1
463,292 - -0.4
463,309 - 0.0
463,336 - -0.0
463,478 + 1.7
463,501 - -1.5
463,602 + 1.3
463,627 + -0.1
463,790 + 13695 mRNA_5327 0.21 1.5
464,013 + 13695 mRNA_5327 0.38 0.6
464,163 - 13695 mRNA_5327 0.49 0.3