Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5311

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5310: 13678 - Hypothetical Protein, at 425565 to 427309 13678 mRNA_5311: 13679 - Hypothetical Protein, at 427613 to 428578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429063 to 429953 13680

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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426,640 + 13678 mRNA_5310 0.62 -0.2
426,642 - 13678 mRNA_5310 0.62 0.6
426,709 + 13678 mRNA_5310 0.66 0.6
427,160 + 1.5
427,240 - 1.5
427,241 + 1.2
427,261 + -0.2
427,314 - -0.1
427,323 - -0.2
427,361 - 0.7
427,364 - 2.7
427,388 - 1.0
427,472 + 1.8
427,487 - 1.2
427,513 + 0.9
427,529 - -0.4
427,548 + -0.2
427,587 - -1.2
427,604 + -1.0
427,620 - -0.0
427,628 - 0.3
427,665 - 0.7
427,667 + -1.0
427,671 + 0.4
427,710 + 13679 mRNA_5311 0.10 1.9
427,744 + 13679 mRNA_5311 0.14 0.3
427,843 + 13679 mRNA_5311 0.24 0.2
428,068 - 13679 mRNA_5311 0.47 0.5
428,075 + 13679 mRNA_5311 0.48 0.9
428,106 - 13679 mRNA_5311 0.51 0.6
428,203 + 13679 mRNA_5311 0.61 -0.2
428,218 - 13679 mRNA_5311 0.63 -0.0
428,251 - 13679 mRNA_5311 0.66 -1.4
428,453 + 13679 mRNA_5311 0.87 -0.3
428,468 - 13679 mRNA_5311 0.89 1.2
428,487 + 0.6
428,635 + -1.6
428,650 + 0.3
428,654 - -0.9
428,664 + 0.3
428,671 - -1.6
428,705 + 0.8
428,720 - 2.1
428,778 - 0.2
428,779 + -0.5
428,781 + 1.7
428,783 + 0.6
428,785 + 0.1
428,787 - 0.8
428,797 - -0.9
428,799 + 0.6
428,800 - -0.2
428,802 - 2.3
428,818 - -1.3
428,819 - 1.7
428,824 - -0.0
428,825 + 1.1
428,827 + 0.5
428,829 + 0.5
428,830 - 1.4
428,836 - 1.5
428,837 + 0.4
428,846 - -0.6
428,898 + -1.3
428,973 + 1.2
429,021 - 0.8