Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5301

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5300: 13668 - K03023 RPC3, POLR3C DNA-directed RNA polymerase III subunit RPC3, at 391828 to 394452 13668 mRNA_5301: 13669 - K13950 pabAB para-aminobenzoate synthetase, at 394643 to 397418 13669 mRNA_5302: 13670 - K08711 ABCG2.PDR, CDR1 ATP-binding cassette, subfamily G (WHITE), member 2, PDR, at 397977 to 403896 13670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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394,615 - -1.1
394,677 - -0.4
394,683 + 2.3
394,684 - 1.9
394,835 - 1.1
395,147 - 13669 mRNA_5301 0.18 0.7
395,158 - 13669 mRNA_5301 0.19 0.4
395,171 + 13669 mRNA_5301 0.19 1.4
395,293 + 13669 mRNA_5301 0.23 0.1
395,524 - 13669 mRNA_5301 0.32 2.1
395,779 + 13669 mRNA_5301 0.41 0.0
395,876 - 13669 mRNA_5301 0.44 0.5
396,025 - 13669 mRNA_5301 0.50 0.5
396,066 + 13669 mRNA_5301 0.51 -0.4
396,429 - 13669 mRNA_5301 0.64 1.9
396,483 + 13669 mRNA_5301 0.66 0.3
396,509 + 13669 mRNA_5301 0.67 -0.8
396,625 - 13669 mRNA_5301 0.71 0.6
396,643 + 13669 mRNA_5301 0.72 -1.2
396,742 + 13669 mRNA_5301 0.76 0.3
396,765 - 13669 mRNA_5301 0.76 1.3
396,956 - 13669 mRNA_5301 0.83 0.1
397,060 - 13669 mRNA_5301 0.87 -0.0
397,161 + -0.3
397,207 - 0.5
397,376 - -0.6
397,498 + 0.6
397,526 + -0.3
397,809 - 1.0
397,818 + -0.2
398,115 + 1.4
398,287 + 2.0
398,287 + 1.5
398,389 - 0.4
398,390 + -1.3