Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5257

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5257: 13625 - K11887 PAAF1, RPN14 proteasomal ATPase-associated factor 1, at 295850 to 297525 13625 mRNA_5258: 13626 - KOG0538 Glycolate oxidase, at 297725 to 299742 13626

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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294,861 + -1.0
294,974 + -1.3
295,112 + 1.3
295,273 + -0.3
295,386 + 1.0
295,812 - -0.1
295,969 + 0.0
296,638 + 13625 mRNA_5257 0.47 -0.3
296,951 - 13625 mRNA_5257 0.66 -0.3
296,975 + 13625 mRNA_5257 0.67 -0.4
297,151 + 13625 mRNA_5257 0.78 -1.2
297,423 + 0.4
297,786 + 1.4
297,834 - -1.0
297,842 + 2.1
297,899 + -1.4
298,098 - 13626 mRNA_5258 0.18 -0.9
298,128 - 13626 mRNA_5258 0.20 -0.2
298,128 - 13626 mRNA_5258 0.20 -0.7
298,239 + 13626 mRNA_5258 0.25 -1.5
298,291 + 13626 mRNA_5258 0.28 1.0