Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5247

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5246: 13614 - K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit, at 255112 to 256642 13614 mRNA_5247: 13615 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 256939 to 258074 13615 mRNA_5248: 13616 - KOG2084 Predicted histone tail methylase containing SET domain, at 258879 to 260199 13616

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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256,671 - -1.6
256,993 + 1.6
257,005 - 0.0
257,555 - 13615 mRNA_5247 0.54 -1.2
257,584 - 13615 mRNA_5247 0.57 0.3
257,755 + 13615 mRNA_5247 0.72 -0.0
257,889 + 13615 mRNA_5247 0.84 1.0
258,058 - -0.9
258,756 + 1.1
258,790 + 0.8
259,047 - 13616 mRNA_5248 0.13 0.1
259,049 - 13616 mRNA_5248 0.13 -0.8