Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5243

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5243: 13611 - KOG1601 GATA-4/5/6 transcription factors, at 247199 to 251043 13611 mRNA_5244: 13612 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 251965 to 253364 13612

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
246,283 - -1.4
246,293 + -0.4
246,297 + 1.6
246,306 + 0.4
246,447 + -0.6
246,451 + 0.4
246,459 + -1.5
246,477 + -1.6
246,597 - -0.3
246,601 + -0.2
246,608 + 1.5
246,612 - -0.2
246,613 + 0.7
246,613 - 1.9
246,614 + 1.4
246,626 - 0.1
246,630 + -1.6
246,631 - -0.3
246,634 + 0.2
246,636 + -0.5
246,664 + -0.9
246,677 - -0.2
246,719 - -0.3
246,729 + 0.1
246,734 - 1.5
246,736 + -0.7
246,736 + -0.3
246,742 - 1.5
246,750 + 0.2
246,752 + 2.4
246,757 + -0.5
246,878 + 1.4
246,934 + 0.7
246,936 + -0.1
246,957 + 0.6
246,957 - 0.1
246,960 + 0.2
246,961 - 0.1
246,961 + 2.9
246,962 - 3.1
246,963 + -1.0
246,966 + 0.2
246,970 - -1.1
246,971 - 0.3
246,974 - -0.2
246,976 + 0.8
246,984 + 2.7
246,986 - -1.1
246,987 + 0.5
246,988 - 0.2
246,993 + -0.0
246,998 + 1.2
247,082 - 0.0
247,144 + -0.1
247,274 + 0.7
247,287 + -0.8
247,287 + -0.3
247,293 + -0.4
247,426 + 0.1
247,437 - -2.4
247,447 - 0.6
247,574 + 0.7
247,705 + 13611 mRNA_5243 0.13 0.5
248,025 + 13611 mRNA_5243 0.21 2.1
248,229 - 13611 mRNA_5243 0.27 -0.8
248,275 - 13611 mRNA_5243 0.28 -0.1
248,450 + 13611 mRNA_5243 0.33 -1.7
248,569 + 13611 mRNA_5243 0.36 -0.1
248,876 + 13611 mRNA_5243 0.44 2.1
248,906 + 13611 mRNA_5243 0.44 0.3
249,144 - 13611 mRNA_5243 0.51 0.8
249,180 + 13611 mRNA_5243 0.52 -0.4
249,324 - 13611 mRNA_5243 0.55 0.0
249,768 + 13611 mRNA_5243 0.67 0.4
250,029 - 13611 mRNA_5243 0.74 1.2
250,367 + 13611 mRNA_5243 0.82 -0.6
250,466 - 13611 mRNA_5243 0.85 0.0
250,902 - -0.3
251,028 - -1.1
251,062 - 1.2
251,190 - 0.3
251,197 - 0.6
251,216 - -0.4
251,218 + -0.3
251,225 - 0.5
251,231 + 0.6
251,233 - 2.8
251,241 + -0.6
251,351 + 1.4
251,354 - 0.4
251,356 - -1.3
251,356 - -0.7
251,365 - 0.5
251,366 + 0.3
251,368 + -0.3
251,369 - 0.8
251,372 + 2.5
251,372 - 0.5
251,373 + 1.2
251,375 - -0.4
251,388 + 0.6
251,392 + -0.1
251,397 - 0.3
251,412 - 0.5
251,414 + -0.2
251,421 - -0.2
251,423 - 2.0
251,425 + -0.1
251,528 + -0.5
251,535 + 1.1
251,537 - -1.1
251,553 + -0.2
251,560 - 0.0
251,561 - -0.4
251,681 + 0.4
251,685 + -0.3
251,702 + 1.7
251,719 + -0.3
251,753 + -2.1
251,755 - 1.3
251,810 - 0.1
251,827 - -0.8
251,835 + 0.8