Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5230

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209416 to 215994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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208,778 + 1.1
208,793 + -0.6
208,812 + 0.2
208,922 - 0.1
208,964 + 0.4
209,051 + 0.9
209,071 + 1.6
209,076 + 0.7
209,085 + 0.5
209,219 + 1.1
209,327 + 0.8
209,389 - 0.9
209,418 + 0.2
209,521 - -1.1
209,764 - -1.8
209,785 - -1.2
209,790 - -0.2
209,821 - -2.0
209,908 + 0.1
209,932 + -1.3
209,950 - 0.6
209,988 - 0.8
210,057 - 0.3
210,073 + -0.3
210,125 + 13598 mRNA_5230 0.11 1.4
210,467 + 13598 mRNA_5230 0.16 0.6
210,659 - 13598 mRNA_5230 0.19 1.5
210,674 - 13598 mRNA_5230 0.19 0.6
210,725 - 13598 mRNA_5230 0.20 1.4
210,768 + 13598 mRNA_5230 0.21 2.7
210,878 + 13598 mRNA_5230 0.22 1.2
211,094 - 13598 mRNA_5230 0.26 0.2
211,098 + 13598 mRNA_5230 0.26 0.9
211,533 + 13598 mRNA_5230 0.32 0.0
211,624 + 13598 mRNA_5230 0.34 0.6
211,629 - 13598 mRNA_5230 0.34 -0.7
211,728 - 13598 mRNA_5230 0.35 -0.4
211,939 - 13598 mRNA_5230 0.38 -0.4
211,942 + 13598 mRNA_5230 0.38 -0.3
212,045 + 13598 mRNA_5230 0.40 0.4
212,077 + 13598 mRNA_5230 0.40 2.6
212,209 + 13598 mRNA_5230 0.42 0.5
212,508 + 13598 mRNA_5230 0.47 1.6
212,536 + 13598 mRNA_5230 0.47 1.7
212,848 - 13598 mRNA_5230 0.52 0.5
212,910 - 13598 mRNA_5230 0.53 0.4
213,045 + 13598 mRNA_5230 0.55 0.9
213,103 - 13598 mRNA_5230 0.56 1.6
213,375 + 13598 mRNA_5230 0.60 1.0
213,384 - 13598 mRNA_5230 0.60 1.4
213,768 + 13598 mRNA_5230 0.66 0.8
213,795 + 13598 mRNA_5230 0.67 1.6
213,906 + 13598 mRNA_5230 0.68 0.7
214,375 + 13598 mRNA_5230 0.75 0.8
214,906 + 13598 mRNA_5230 0.83 0.6
214,937 + 13598 mRNA_5230 0.84 -0.3
215,355 - 0.0
215,380 - 1.3
215,386 + 2.7
215,573 + 3.1
215,649 + 0.3
215,652 - 0.7
215,807 + 0.4
215,920 + -1.0
215,947 + -1.1
215,952 - 0.7
215,976 + -1.0
216,104 - 1.7
216,216 - -0.2
216,296 + -0.4
216,375 - -0.2
216,378 + -0.9
216,423 + 1.0
216,429 - -0.2
216,579 + -0.8
216,673 + 13599 mRNA_5231 0.10 0.6
216,705 - 13599 mRNA_5231 0.12 -0.1
216,812 + 13599 mRNA_5231 0.19 0.0