Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5197

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5196: 13564 - K17218 sqr sulfide-quinone oxidoreductase, at 126891 to 128997 13564 mRNA_5197: 13565 - Hypothetical Protein, at 129115 to 130730 13565 mRNA_5198: 13566 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 131412 to 133498 13566

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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128,126 - 13564 mRNA_5196 0.59 0.6
128,134 + 13564 mRNA_5196 0.59 -2.1
128,233 - 13564 mRNA_5196 0.64 0.6
128,280 - 13564 mRNA_5196 0.66 0.2
128,286 - 13564 mRNA_5196 0.66 0.3
128,289 + 13564 mRNA_5196 0.66 -1.3
128,292 + 13564 mRNA_5196 0.66 0.1
128,292 - 13564 mRNA_5196 0.66 -1.5
128,293 + 13564 mRNA_5196 0.67 -1.0
128,321 - 13564 mRNA_5196 0.68 0.1
128,327 - 13564 mRNA_5196 0.68 -0.9
128,468 + 13564 mRNA_5196 0.75 -0.6
128,497 - 13564 mRNA_5196 0.76 0.7
128,593 + 13564 mRNA_5196 0.81 0.3
128,766 - 13564 mRNA_5196 0.89 2.6
128,861 - -1.1
128,919 + 1.6
129,038 - 0.4
129,055 + -0.2
129,145 - 0.7
129,167 - 0.7
129,189 - 0.1
129,234 - 2.8
129,300 - 13565 mRNA_5197 0.11 1.4
129,366 - 13565 mRNA_5197 0.16 2.2
129,391 - 13565 mRNA_5197 0.17 0.0
129,648 - 13565 mRNA_5197 0.33 1.8
129,660 + 13565 mRNA_5197 0.34 0.6
129,797 - 13565 mRNA_5197 0.42 -0.2
129,812 + 13565 mRNA_5197 0.43 2.5
129,813 - 13565 mRNA_5197 0.43 1.1
129,900 + 13565 mRNA_5197 0.49 0.9
129,966 + 13565 mRNA_5197 0.53 0.3
130,095 + 13565 mRNA_5197 0.61 0.2
130,108 - 13565 mRNA_5197 0.61 -0.9
130,173 - 13565 mRNA_5197 0.65 -0.8
130,348 + 13565 mRNA_5197 0.76 0.8
130,415 - 13565 mRNA_5197 0.80 0.8
130,804 - -1.2
130,808 + -0.3
130,835 - 0.7
130,950 - 0.4
130,965 - -0.1
131,021 - -0.9
131,100 + 0.1
131,117 + 0.1
131,129 - 1.4
131,138 + 1.7
131,143 - 0.2
131,144 + 0.8
131,149 + 0.9
131,169 + -1.2
131,169 + 0.8
131,182 + 0.3
131,186 + 0.9
131,186 + -0.3
131,187 + -0.1
131,208 + 0.7
131,211 + 0.1
131,217 - 1.2
131,217 - 1.7
131,227 - 0.2
131,227 - 0.8
131,240 + -0.3
131,264 - 0.7
131,275 - -0.2
131,277 + 0.4
131,289 - -0.5
131,307 - 0.3
131,320 + 1.1
131,325 - 1.0
131,356 + 0.5
131,375 - -1.0
131,439 - -1.3
131,442 + -0.2
131,521 + 0.2
131,631 + 13566 mRNA_5198 0.10 -0.8